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  1. Foodborne Pathogens

Leafy Greens STEC Action Plan

collage of three photos showing various types of leafy greens growing in fields, including a tractor, soil, and an irrigation pipe with a sprinkler

FDA and USDA Scientists Research Seasonal Effects Linked to E.coli Outbreaks in Bagged Romaine

The FDA and the U.S. Department of Agriculture’s Agricultural Research Service published a study on the relationship between the lettuce microbial ecology and the potential for E. coli O157:H7 survival. This research is significant in helping to reduce foodborne illnesses linked to the consumption of leafy greens. It also aligns with FDA’s efforts to advance its Leafy Greens STEC Action Plan.

Leafy Greens STEC Action Plan - Priority Areas Infographic

Priority Areas Infographic 


Leafy greens are among the most widely consumed vegetables and an important part of an overall healthy diet. However, while millions of servings are consumed safely every day, leafy greens have been repeatedly associated with illnesses caused by Shiga toxin-producing E. coli (STEC), the most common of which is E. coli O157:H7. FDA is committed to breaking this cycle of reoccurring outbreaks.

Over the last several years the FDA and partners in the public and private sectors have worked to enhance the safety of leafy greens through the development and implementation of the Leafy Greens STEC Action Plan (LGAP). This work includes prioritized inspections, focused sampling, stakeholder engagement and collaboration, data sharing, root cause investigations, and advancements in the science of detection and prevention. 

Collectively, this work has expanded our body of knowledge about how and why outbreaks linked to leafy greens have occurred, which has guided and informed the evolution of the action plan over the years. Still, we know that we cannot fix the issue of leafy green contamination on our own. Industry leadership, along with collaboration among growers, processors, retailers, state partners, and the broader agricultural community, is critical to establishing needed prevention measures and preventing foodborne illness.  

The following table provides the approaches for three priority areas: Prevention, Response, and Addressing Knowledge Gaps, as well as accomplishments that have been made since the action plan launched in March 2020.

Prevention: Advance Agricultural Water Safety

Agricultural water can be a major conduit of pathogens that can contaminate produce and a number of recent outbreaks involving leafy greens have had water contamination as a potential contributing factor. The following actions are intended to enhance the safety of agricultural water used in the production of leafy greens.



Key Accomplishments 2020-2022

1.1  Complete a rulemaking for the agricultural water provisions of the Produce Safety Rule for covered produce other than sprouts.


1.2 Engage with stakeholders to collaboratively advance the safety of agricultural water through education, outreach, and technical assistance.

  • In both 2020 and 2021, the FDA engaged with numerous growers about the importance of using Good Agricultural Practices, especially as they apply to agricultural water, including via the California and Arizona Leafy Green Marketing Agreements (LGMA) and the International Association of Food Protection Annual Meeting. 

  • In 2021, the FDA, with national and state partners, developed and piloted an agricultural water systems workshop in North Carolina. The pilot was held on March 10-11, 2021, and the agency is exploring options to conduct a second pilot in 2022.

  • In 2021 and 2022, FDA subject matter experts participated in several stakeholder meetings and webinars to discuss requirements for harvest and post-harvest agricultural water and the potential changes to the pre-harvest standards.

1.3. Reduce contamination through the development and use of agricultural water treatment options. 


  • Co-developed a protocol with the Environmental Protection Agency (EPA) for developing data in support of new and amended registrations for preharvest agricultural water treatments.

  • In May 2022, announced two updates to the protocol to make it more feasible for stakeholders to develop and register their treatments.

  • The FDA and the EPA are actively engaged with chemical manufacturers in support of treatment development.

  • Engaged with LGMA and EPA to improve the protocol to be reflective of real-world practices.

Prevention: Enhance Inspections, Audits and Certification Programs

Enhanced inspections, audits, and certifications can help ensure that growers are prepared for compliance with the Produce Safety Rule, provide insights to regulators regarding compliance trends, and help regulators address misunderstandings that may lead to future food safety issues on a farm. The following actions reflect how FDA intends to work with states and industry stakeholders to prioritize and enhance inspections, audits, and certifications across the leafy greens industry.



Key Accomplishments 2020-2022

2.1 FDA and state partners will prioritize inspections based on information collected during past foodborne illness outbreaks.

  • A list of leafy greens farms identified by FDA via foodborne illness outbreak traceback investigations was provided to FDA State partners in California to inform produce farm inspection prioritization during the growing season.

2.2 Continue providing technical assistance to efforts by industry and other  stakeholders to enhance audit standards and verification activities related to agricultural water, adjacent or nearby land use, and soil amendments.

  • In 2020, the FDA participated in a series of Leafy Greens Marketing Agreement (LGMA) and Western Growers Association (WGA) meetings offering technical assistance to the LGMA’s metrics review process and perspective on how current metrics and updates relate to the Produce Safety Rule.

  • In 2021, the FDA participated in CA LGMA technical committee meetings, offering technical assistance on metrics review and the development of an adjacent lands risk assessment tool. FDA provided perspective on how potential updates/changes and the new risk assessment tool aligned with the Produce Safety Rule and FDA current thinking. The tool is in development.

Prevention: Buyer Specifications

Retailers are often the intermediaries between the grower and the consumer. As such, many set standards – buyer specifications – that produce growers need to meet for retailers to buy and sell their products. The FDA has identified steps we can take, including technical assistance to buyers, to improve the safety of leafy greens.



Key Accomplishments 2020-2022

3.1 Continue to engage and provide technical assistance to retailer and food service stakeholders on the role of strengthened buyer specifications, such as enhanced third party-audits, end-to-end traceability, and root cause analysis activities in enhancing the safety of leafy greens.

  • The FDA met with and established multiple partnerships with retail and food service stakeholders (Restaurant Food Safety Partnership, Retail Food Store Partnership, and Leafy Greens Safety Coalition) to discuss means to enhance the safety of leafy greens. FDA also provided technical assistance to a retail trade association on recommendations for leafy green buyers including buyer specifications and barriers to the implementation of best management practices.

  • FDA provided technical assistance to the Food Marketing Institute (FMI) when they updated the FMI Recommended Food Safety Practices for Leafy Greens.

Prevention: Leafy Greens Data Trust

Shared data can help to inform our understanding of leafy greens outbreaks and mitigation strategies that can be used to prevent future outbreaks. Therefore, the FDA is interested in exploring options for public-private data trusts that help to facilitate the sharing of data.

This work also falls under Core Element 2.2 “Strengthen Predictive Analytics Capabilities” of the New Era of Smarter Food Safety Blueprint.



Key Accomplishments 2020-2022

4.1 Engage and collaborate internally and externally to explore methods for public-private data trusts.



  • In 2020, the FDA met with Western Growers Association and offered support, through the form of a letter, for widespread participation from industry in the Western Growers Association data sharing/analytics program. 

  • In 2021, FDA subject matter experts joined a newly formed Western Growers Food Safety Stakeholder Committee to explore use of the Western Growers Food Safety Data-Sharing Platform. 

  • Western Growers partnered with Crème Global to develop a food safety data sharing tool. The tool can capture food safety data generated during pre-season, pre-harvest, and post-harvest activities. It currently focuses on pre-harvest data and other metadata.

  • Western Growers completed the project phase with five pilot participants. The first version of the tool was released late in 2021. Currently, Western Growers is focused on recruitment of additional industry members and expanding marketing and communication efforts.

  • While discrete data sharing currently is between industry participants, Western Growers has asked FDA and other stakeholders for input on what type of aggregated data would be useful to share with regulatory agencies.

  • A session entitled “Driving a Cultural Change in Produce Safety through the Use of a Novel Confidential Data Sharing Platform” focused on this work at the International Association for Food Protection Annual Meeting on 8/2/2022.

Prevention: Microbiological Surveys for STEC Detection and Enhanced Sampling Protocols

The agency conducts microbiological sampling assignments to identify potential contamination events associated with leafy greens and to help prevent contaminated leafy greens from entering commerce, when possible. The following actions reflect the agency’s plans for enhanced sampling to improve the safety of leafy greens.



Key Accomplishments 2020-2022

5.1. Conduct additional, focused sampling assignments for romaine lettuce grown in Arizona and California, as necessary.

  • In FY20-21 the FDA completed a focused sampling assignment of romaine lettuce grown in Arizona

  • In 2021, FDA posted the result of romaine lettuce product sampling conducted in 2019 and 2021.

  • In addition, the FDA conducted a product sampling assignment consisting of over 500 samples of lettuce (iceberg, leaf, and romaine) grown in Salinas Valley, from mid-May to the end of the harvest season in November 2021. A summary report was published in September 2022.

5.2 Continue working with stakeholders to share knowledge on new technologies and sampling approaches.

  • The FDA completed several enhanced detection and isolation protocols for the sampling of STEC and Salmonella. These methods were shared at the CFSAN/ORA Environmental Microbiology Methods Summit, the FDA Office of Regulatory Science / Office of Applied Research and Safety Assessment roundtable and at an Association of Official Analytical Chemists (AOAC)-convened national environmental methods symposium. The methods are now fully utilized by FDA field staff during sampling.

  • The FDA has posted an SOP for the use of Dead-End Ultrafiltration (DEUF) for the Detection of Bacterial Pathogens from Agricultural Water and a training video on FDA.gov.

  • The FDA participated in the delivery of an AOAC Training for environmental sampling.

Prevention: Increase Awareness and Address Concerns Around Adjacent and Nearby Land

Several recent leafy greens outbreak investigations have emphasized that conditions and practices on adjacent and nearby land can play a critical role in contributing to produce contamination. The strategies identified below are intended to raise awareness and minimize the risks stemming from certain activities and conditions on adjacent and nearby land.



Key Accomplishments 2020-2022

6.1 Provide education and technical assistance regarding potential impacts of adjacent and nearby land use on leafy green safety.

  • Provided technical assistance to LGMA workgroups on hazards associated with adjacent and nearby land use activities.

6.2 Engage with government partners as well as local, regional, and national industry stakeholders to identify strategies for minimizing risks presented by the presence of livestock on adjacent and nearby land.   

  • Leafy Green Safety Coalition of Retailers established to strengthen prevention practices and traceback and to improve scientific basis for assuring the safety of leafy greens.

  • California Agricultural Neighbors (CAN) established and convened by California Department of Food and Agriculture (CDFA) provides an opportunity to foster awareness, collaboration, discussion, and implementation of food safety best practices among neighboring agriculture operations. The CAN released their action plan in June 2022 outlining recommended actions for good neighbor-to-neighbor communications on seasonal activities, action steps toward food safety integrity, and defining knowledge gaps that require further research and collaboration

  • AFDO Healthy People 2030 STEC Leafy Green Work Group established with the object to reduce the number of infections due to STEC outbreaks.

Prevention: Establish and Strengthen Regular Outreach and Communication Programs for Stakeholders in Growing Regions

Building relationships with our partners in leafy green growing regions can help us to better understand and respond to contamination events in those areas. The following strategies focus on building our relationship with our leafy green stakeholders in California and Arizona, the two biggest production areas for leafy greens sold in the US.



Key Accomplishments 2020-2022

7.1 Continue ongoing dialogue on region-specific issues in real time with a broad array of Yuma growing region stakeholders.

  • The FDA established biannual meetings between the FDA, the Arizona Department of Agriculture, and the Yuma Fresh Vegetable Association to discuss leafy greens safety issues.

7.2 Continue ongoing dialogue on region-specific issues in real time with a broad array of California growing region stakeholders.

  • The FDA established and continues monthly meetings between the FDA, the California Department of Food and Agriculture (CDFA), and the California Department of Public Health (CDPH) to discuss leafy greens safety issues.  These monthly meetings coordinate collaborative efforts to enhance the safety of leafy greens, including ongoing work on the CA Longitudinal research study, California  Agricultural  Neighbors workgroup, AFDO Healthy People 2030 Committee produce workgroup, prioritizing leafy greens farm inspections, and sampling assignments.

Response: Investigation Reports

Investigation reports provide insights into the potential routes of contamination that stakeholders can use to better assess their own farms and situations. The reports can also help to identify contamination trends over time. The FDA intends to continue to release investigation reports following STEC outbreaks linked to leafy greens. 



Key Accomplishments 2020-2022

8.2 Continue releasing new investigation findings to shed light on the potential routes and possible mitigation strategies for STEC contamination of leafy greens.

  • In 2020 and early 2021, the FDA published the investigation reports on the 2019 and 2020 STEC outbreaks linked to the consumption of leafy greens which outlined the epidemiological and traceback information, on-farm investigation approaches, and key findings. Following each release, the FDA engaged with the industry and trade associations to discuss the findings and encourage collaboration to work toward preventing future outbreaks.

Response: Conduct Follow-Up Surveillance During the Fall California Growing / Harvest Season

Public health officials sometimes learn about outbreaks long after the contamination event occurred, and in the case of leafy greens it can even be after the harvest season has ended, which makes investigations difficult. Therefore, the agency will work with state partners to conduct surveillance inspections and sampling of farms that may have been linked to previous outbreaks to identify potentially contributing factors and to help prevent future contamination events.



Key Accomplishments 2020-2022

9.1 Continue to coordinate with the California Department of Food and Agriculture  (CDFA), in coordination with California Department of Public Health (CDPH), to conduct focused follow-up investigations and limited produce sampling of farms/ranches identified by foodborne illness outbreak traceback investigations.  

  • In 2020, the FDA, in consultation with CDFA, issued a mission critical assignment to conduct follow-up investigations of farms in the Salinas, California growing region during harvest.  

  • In 2021, CDFA conducted follow-up produce safety inspections of leafy greens farms and associated ranches that were identified by traceback investigation in 2020 leafy greens foodborne illness outbreaks. Results of these CDFA inspections were of the 38 priority farms inspected, none were categorized as having Official Action Indicated and 20 farms were categorized as having Voluntary Action Indicated with no significant deficiencies identified.

  • In 2022, CDFA is again conducting follow-up produce safety inspections of leafy greens farms and associated ranches that were identified by traceback investigation in 2021 leafy greens foodborne illness outbreaks.

Response: Promote Tech-Enabled Traceability

When foodborne illness outbreaks occur, efficient product tracing helps government agencies and those who produce and sell food to rapidly find the source of the product and where contamination may have occurred. This can facilitate faster removal of the affected product from the marketplace, reducing incidences of foodborne illnesses. The strategies below are intended to help enhance the traceability of leafy greens and other products.

These strategies are also a part of Core Element 1 “Tech-Enabled Traceability” of the New Era of Smarter Food Safety Blueprint.



Key Accomplishments 2020-2022

10.1.1 Advance the traceability of leafy greens through the issuance of the Food Traceability Final Rule.

  • In September 2020, the FDA published in the Federal Register a proposed rule to establish additional traceability recordkeeping requirements (beyond what is already required in existing regulations) for persons who manufacture, process, pack, or hold foods the agency has designated for inclusion on the Food Traceability List, including leafy greens. The agency anticipates issuing the final rule in November 2022.

10.2.1 Collaborate on an industry led effort to develop further documentation of the leafy greens pilot completed in 2020 including (1) providing additional details on how each pilot team executed their tracebacks, (2) developing considerations for future pilot project methodologies and real world traceback investigations, and (3) providing education and outreach materials.

  • The FDA collaborated with an industry-led Leafy Green Traceability Pilot to plan, initiate, and work with identified volunteers/industry experts to execute pilot scenarios that replicated a traceback investigation; and review and synthesize the data in a report published by the Leafy Greens Task Force in December 2020.

Response: Improve Utilization of Shopper Card Data

Many customers use shopper loyalty cards during purchases, which can provide critical information about purchase history during an outbreak. The FDA is exploring strategies for how we can better utilize available shopper card information during outbreak and recall events.

These strategies are also a part of Core Element 1 “Tech-Enabled Traceability” of the New Era of Smarter Food Safety Blueprint and the Foodborne Outbreak Response Improvement Plan.



Key Accomplishments 2020-2022

11.1 Continue work with retailers and government partners to improve the timely collection and transmission of purchase information during an open traceback investigation, including providing technical assistance in efforts to develop electronic data requests and data-sharing templates to support rapid traceback and convergence analysis.

  • The FDA served as the co-lead with US Department of Agriculture’s Food Safety Inspection Service (USDA FSIS) in the Shopper History Outbreak Partnership (SHOP) Workgroup.  Working with state representatives this workgroup has begun development of a best practices document regarding the use of shopper history during foodborne illness investigations.

  • The FDA provided technical assistance to the Conference for Food Protection (CFP) Foodborne Illness Investigation Committee. This group—comprising federal, state, and local regulators, as well as industry, academic, and consumer stakeholders—is determining how consumer purchase data could be utilized during foodborne illness investigations at the state and local levels.

  • The FDA has drafted and piloted the use of a Digital Data Request Template for retailers to quickly provide traceability information that links back to consumer purchase data of cases within an outbreak investigation. These templates build upon the goals outlined within the FDA Foodborne Outbreak Response Improvement Plan, which focuses on smarter ways to digitize and routinize the traceback process.

Response: Accelerate Whole Genome Sequencing (WGS) Data Submissions by States

As a method and tool for public health, WGS provides the highest resolution of current molecular subtyping methods and provides definitive evidence to detect and characterize pathogens. Genomic data from foodborne pathogens, by itself and in combination with other information, is a robust resource that can help us rule out or rule in specific strains during outbreak events. The more strains added to public databases such as PulseNet and GenomeTrakr, the greater the opportunities we have to find similar or matching strains that can provide insight into the source of the outbreak.

This work is also listed under New Era of Smarter Food Safety Core Element 2.5 “Outbreak Response.”



Key Accomplishments 2020-2022

12.1 Continue work with Centers for Disease Control and Prevention (CDC), state departments of health, and global laboratories to accelerate sequencing submissions to public databases such as PulseNet and GenomeTrakr.

  • The FDA improved the process for sample analysis and reporting, including pushing genome assemblies rather than raw data of FDA isolates to PulseNet; established a dashboard to retrieve assemblies that are generated in real-time for FDA isolates; and devoted resources to increase staffing to assist with pushing data to PulseNet.

  • The number of states submitting data has increased to 32, including 17 private laboratories and 8 federal partners.

Response: Advance Root Cause Analysis

Findings from root cause analyses can serve an important function in helping industry modify practices to avoid identified risks and can provide more robust data for predictive analytics. The following strategies are intended to enhance future root cause analysis work.

This work is also part of Core Element 2.1 “Invigorate Root Cause Analysis” of the New Era of Smarter Food safety Blueprint.



Key Accomplishments 2020-2022

13.1 Coordinate with federal, state, local, tribal and territorial, and international partners to strengthen root cause analysis procedures and ensure rapid deployment as soon as an outbreak is traced to a specific site. 

  • In 2020, the FDA conducted multiple discussions with produce industry trade and buyer groups to encourage widespread industry adoption of root cause analysis and the FDA participated in industry-led education outreach efforts on this topic.

  • In 2021, In collaboration with the AFDO Healthy People 2030 Committee Produce Workgroup, FDA is working to address three main areas of Root Cause Analysis (RCA)/Root Cause Investigation (RCI): (1) Conducting RCA/RCI, (2) data sharing, and (3) implementation of RCA/RCI.  The workgroup has identified the tools currently available and most often used for RCA/RCI.

  • Western Growers published two produce industry guidance documents: 1) When To Do Root Cause Analysis: A Decision-Making Guide for the Produce Industry and 2) Conducting Root Cause Analysis: A “How-To” Guide for the Produce Industry

Response: Enhance Outbreak and Recall Communications

Enhanced outbreak and recall communications can provide transparency around emerging food safety issues to ensure that industry, consumers, and other stakeholders are on the lookout for issues, even before a specific product/source is identified.

This work is also being conducted as part of the New Era of Smarter Food Safety Core Element 2.5 "Outbreak Response."



Key Accomplishments 2020-2022

14.1 Continue to collaborate with government partners to review and evaluate outbreak communication mechanisms and propose enhancements for continuous improvement. 

  • In 2020 the FDA launched the core investigation table summarizing ongoing outbreak investigations.  This webpage, which is updated weekly, increased transparency and the availability of risk communication information for stakeholders about currently developing foodborne outbreaks.

  • In 2021 the FDA conducted an independent review of FDA’s foodborne illness outbreak response process and recommendations were prepared and published.

  • Based on the 2021 independent review, FDA’s Foodborne Illness Outbreak Response Improvement Plan was developed and published in 2022.  FDA continues to work on improvements identified in the plan.

Addressing Knowledge Gaps: Longitudinal Studies

Understanding how pathogens survive, move, and possibly contaminate produce prior to harvest – and over the course of time – can help us better understand how pathogens in the environment can impact the safety of leafy greens. Multi-year longitudinal studies will contribute new knowledge on how various environmental factors may influence bacterial persistence and distribution in a growing region, and how those factors may impact the risk of produce becoming contaminated.



Key Accomplishments 2020-2022

15.1 Continue to support the ongoing Yuma Longitudinal Study to shed light on how human pathogens survive, move, and possibly contaminate produce prior to harvest.

  • In 2019 the FDA formally initiated a multi-year Yuma Longitudinal Study to better understand the ecology of human pathogens in the environment in the Yuma agricultural region. This initiative is a multi-year study which will focus on how these pathogens survive, move, and possibly contaminate produce prior to harvest. The FDA is now in its third year of the study. The second year of the study slowed due to restrictions associated with the COVID-19 pandemic, but the study is now back on track and extensive environmental sampling has resumed.  Numerous samples of water, sediment, and air continue to be collected and analyzed for STEC and Salmonella.

15.2 Continue to support the ongoing California Longitudinal Study focusing on manure waste and other run-off targets from large dairy operations and surrounding ecosystems.

  • In 2020 the FDA initiated a multi-year California Longitudinal Study. The California longitudinal multi-year study will examine how pathogens survive, move through the environment, and possibly contaminate produce, through work with water quality, food safety, and agricultural experts from CDFA, the Western Center for Food Safety at UC Davis, representatives from various agriculture industries, and members of the leafy greens industry. The study is now entering its second year. The first year of the study slowed considerably due to restrictions associated with the COVID-19 pandemic.  However, the study is moving back on track and regular sampling is now underway at several environmental and agricultural sites in the Salinas growing area. 

Addressing Knowledge Gaps: Data Mining and Analytics on Previous Outbreaks

Analyzing data and information from past outbreaks can be used identify insights into factors that may be contributing to leafy greens outbreaks over time. These insights can help inform the development of strategies to help prevent further outbreaks.



Key Accomplishments 2020-2022

16.1 Collaborate with Centers for Disease Control and Prevention (CDC), as well as state and other federal partners, to conduct retrospective analyses of past leafy greens outbreaks

16.2 Continue to collaborate with research organizations to characterize the role of seasonality and regional factors in STEC outbreaks involving leafy greens.  

  • The Center for Produce Safety evaluated the role of seasonality in STEC outbreaks involving leafy greens.  Five CPS Briefs were developed in 2021: 1) Hypothesis Risk Matrix, 2) Leafy Greens Production, 3) Regional Cattle Management Profile, 4) Genomics & SNPs, and 5) Bioaerosol Risk (all issue briefs can be found under the resources tab on the Center for Produce Safety’s Website.)

Addressing Knowledge Gaps: Adjacent and Nearby Land Use

Several recent leafy greens outbreak investigations have emphasized that conditions and practices on adjacent and nearby land can play a critical role in contributing to produce contamination. The following strategies are intended to help us close knowledge gaps on how activities and conditions on adjacent and nearby land can contribute to leafy green contamination and what mitigation strategies might be employed to address the issue.



Key Accomplishments 2020-2022

17.1 Continue to collaborate with federal and state partners, research organizations, and industry stakeholders to provide technical assistance and explore research on the impact of adjacent and nearby land use on leafy green growing areas. Prioritize collection of additional data and information that will help growers implement effective science-based mitigation strategies.

  • The FDA communicated with federal agencies and food industry groups to evaluate opportunities and barriers related to implementing science-based practices and mitigations.  Outcomes from these discussions included technical assistance activities and further outreach engagements with several industry representatives.

17.2 Continue working with government partners and industry stakeholders to explore the implications of cattle raised near leafy green growing areas and research into pre-harvest mitigation strategies related to cattle.

  • In 2020, the FDA provided technical assistance to a locally led, locally convened effort called California Agricultural Neighbors (CAN) workgroup that is being led by the CDFA and Monterey County Farm Bureau to identify what actions can be taken now to reduce the risk of STEC contamination of leafy greens in this specific growing region.


  • In June 2021, the California Agricultural Neighbors Interim Report on best practices to help enhance localized food safety efforts issued.  The work conducted by CAN Dialogue Group fostered a deeper understanding among Salinas Valley agricultural neighbors of the practices that commonly take place throughout the year.  The work of the group identified collective themes for discussion, recommendations for consideration, and opportunities where we can expand on current knowledge and understanding of the issues.

  • FDA completed a literature review and identified the portfolio of products for pathogen reduction in cattle.

  • CDFA has sponsored a Phase 1 study (being conducted by UC Davis) on the use of a cattle vaccine (E. coli 0157 SRP vaccine) to evaluate the safety in cow-calf production operations and the transference of antibodies from cows to their calves. This was the first step in a multi-phase research project.   

Addressing Knowledge Gaps: Compost Sampling Assignment with California

A major concern when it comes to produce contamination is the microbiological status of manure and compost used in the growing process. Understanding the effectiveness of intervention strategies designed to reduce or eliminate the presence of pathogens in compost can help inform FDA’s understanding of routes of contamination in the growing area.



Key Accomplishments 2020-2022

18.1.1 Finalize and post a document summarizing all actionable data for consideration in directing future policy, guidance, and research activities around the safe and effective use of biological soil amendments of animal origin.

18.1.2 Advance second round of contractor-based sampling now underway to analyze additional compost samples.

  • The FDA, utilizing an external contract laboratory, commenced collecting and analyzing numerous samples for microbial pathogens, including finished brown compost collected from the Southwest Arizona and Imperial Valley, California leafy green growing regions and soil samples collected by the FDA from the Yuma region.  In addition, the FDA collaborated with the California Department of Food and Agriculture (CDFA) who collected and analyzed samples during Fall 2020 sampling. Progress for compost samplings slowed somewhat in 2020 due to COVID-19 restrictions.

  • In 2021, the FDA, utilizing an external contract laboratory, collected and analyzed 644 manure and soil samples for Salmonella, STEC and Listeria monocytogenes.  The FDA is developing a summary report with results from the survey anticipated to be published in 2022.

18.2 CDFA with state partners, will conduct additional surveillance sampling of biological soil amendments of animal origin. Results of this surveillance work will serve as important data points to ensure the entire system works in an effective, integrated way to help ensure soil amendments are processed and handled in a manner to reduce or eliminate microbial pathogens.    

  • CDFA collected and tested compost and processed (heat-treated) manure samples from 39 facilities starting in fall 2019 through 2021. One compost sample contained STEC and Listeria monocytogenes. Elevated fecal coliform populations were found in finished compost in 11 facilities sampled. All but one composts with elevated fecal coliform levels used either green-waste, green-waste & food-waste, or green-waste and grape pomace as feed stocks (green-waste is non-manure biodegradable waste). The findings reinforce current policy around the use of compost as promulgated under the Produce Safety Rule.

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