ALLERGENIC PRODUCTS ADVISORY
COMMITTEE
CENTER FOR BIOLOGICS EVALUATION
AND RESEARCH
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ALLERGENIC PRODUCTS ADVISORY
COMMITTEE MEETING
By Teleconference
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PUBLIC MEETING
Friday, April 2,
2004
This transcript has not been edited or corrected,
but appears as received from the commercial transcribing services. Accordingly, the Food and Drug
Administration makes no representation as to its accuracy.
The
above-entitled Public Meeting was held at 1:00 p.m., in Conference Rooms A and
B, Building 29B, on the National Institutes of Health campus, Bethesda,
Maryland, Dr. Wesley A. Burks, Acting Chair, presiding.
PARTICIPANTS:
A. WESLEY BURKS, M.D.,
Acting Chair (via telephone)
JANE
S. BROWN, Committee Management Specialist
WILLIAM
FREAS, Ph.D., Executive Secretary
COMMITTEE MEMBERS: (via telephone)
MELVIN
BERGER, M.D.
LYNELLE
C. GRANADY, M.D.
REBECCA
S. GRUCHALLA, M.D., Ph.D.
PETER
R. HAUCK
DOLORES
C. LIBERA
HAROLD
S. NELSON, M.D.
PRESENTERS:
RONALD
RABIN, M.D.
JAY
SLATER, M.D.
A-G-E-N-D-A
Page
No.
Administrative Remarks 4
Opening Remarks, WESLEY BURKS, M.D.,, Acting
8
Committee
Chair
COMMITTEE UPDATES:
Laboratory of Immunobiochemistry: Personnel 10
and Regulatory Updates, JAY E. SLATER, M.C.,
DBPAP, Laboratory Chief
Research Summary, JAY E. SLATER, M.D., DBPAP,
13
Laboratory Chief, RONALD RABIN, M.D., DBPAP,
27
Senior
Staff Fellow
Cockroach Allergen Standardization 42
JAY E. SLATER, M.D., DBPAP, Laboratory
Chief
Use of Microarray Technology in Allergen 60
Standardization, JAY E. SLATER, M.D., DBPAP,
Laboratory Chief
Open Public Hearing 81
Committee Discussion 82
P-R-O-C-E-E-D-I-N-G-S
1:04
p.m.
DOCTOR
FREAS: Let me just introduce myself to everybody. I am Bill Freas, I'm the Executive Secretary for today's advisory
committee meeting, and this is the 20th meeting of the Allergenic
Products Advisory Committee.
We
are holding this meeting in Conference Rooms A and B, in Building 29B, on the
NIH campus. There's a speaker phone
here for public participation, and, of course, the public is more than welcome
to participate in our advisory committee meetings.
The
entire meeting for today will be open to the public, as announced in the Federal
Register on March 10, 2004.
At
this time, for the people in the room and for the people on the phone lines, I
would like to go around and introduce the committee members. They are our Acting Chair, Doctor Wesley
Burks, Chief of Pediatric Allergy and Immunology, Duke University Medical
Center. Doctor Burks can you say
present?
ACTING
DIRECTOR BURKS: Present.
DOCTOR
FREAS: Doctor Rebecca Gruchalla is next, Associate Professor of Internal
Medicine, University of Texas Southwestern Medical School.
DOCTOR
GRUCHALLA: Present.
DOCTOR
FREAS: Doctor Melvin Berger, Professor of Pediatrics and Pathology, Case
Western Reserve School of Medicine.
DOCTOR
BERGER: Present.
DOCTOR
FREAS: Doctor Harold Nelson, Senior Staff Physician, National Jewish Medical
Center.
DOCTOR
NELSON: Present.
DOCTOR
FREAS: Our non-voting industry representative, Peter Hauck, Executive Director
for Scientific Affairs, Allergen Products Manufacturers Association.
MR.
HAUCK: Present.
DOCTOR
FREAS: Our acting consumer representative, Ms. Dolores Libera, Director of
Publications, Allergy and Asthma Network, and Mothers of Asthmatics,
Incorporated, Fairfax, Virginia.
MS.
LIBERA: Present.
DOCTOR
FREAS: And, we will soon be joined by Doctor Lynelle Granady, Associate
Physician with ENT and Allergy Associates, New York, New York.
Unfortunately,
Doctor Susan McDonald, from the Johns Hopkins University, could not join us
today.
Now,
should anybody get dropped from this teleconference, you all have the
instructions of how to join us, but just to repeat, you dial 1-888-577-8990,
enter a pass code of 25660, and push the # sign, and please rejoin us.
Now,
as I said, there are about 20 people in the room. I will not introduce all of them, but there are several key FDA
staff that I would like to introduce.
Oh,
Doctor Granady, did you just join us?
DOCTOR
GRANADY: Yes.
DOCTOR
FREAS: Well, thank you very much. We
have just been joined by Lynelle Granady, Associate Physician with ENT and
Allergy Associates, New York, New York.
Thanks for joining us. We are
just going around now and introducing some of the key FDA people. There are about 25 people in the room now, I
would guess, and I won't introduce everybody, but I would like to acknowledge
Doctor Richard Walker, Director, Division of Bacterial, Parasitic and
Allergenic Products. At the table is
the organizer for this meeting here, Doctor Jay Slater, Chief of Laboratory and
Immunobiochemistry. And, also at the
table is Doctor Ronald Rabin, Senior Staff Fellow, Laboratory of
Immunobiochemistry.
Now,
we also have a transcriber here, and I must ask all committee members on the
telephone lines to please identify yourselves each and every time you speak,
because we are trying to transcribe an official record of this meeting, and we
want to be able to attribute the comments to the appropriate individual. So, please identify yourself each and every
time you speak.
Now,
I'd like to read into the public record the Conflict of Interest Statement
written for this meeting. "The
following announcement addresses the conflict of interest issues associated
with this meeting of the Allergenic Products Advisory Committee on April 2,
2004. The Director of the Center for
Biologics Evaluation and Research has appointed Ms. Dolores Libera as a
temporary voting member for this meeting.
Based on the agenda, it has been determined that there are no specific
products being approved at this meeting.
The committee participants have been screened for their financial
interests. To determine if any conflict
of interest existed, the Agency reviewed the agenda and all relevant financial
interests reported by the meeting participants. No waivers were required under 18 US Code 208. We would like to note for the record that
Mr. Peter Hauck is participating in this meeting as a non-voting industry
representative, acting on behalf of regulated industry. Mr. Hauck's appointment is not subject to 18
USC Code 208, he is employed by Alk Abello, Incorporated, and thus has
financial interests in his employer.
Mr. Hauck also serves as the Executive Director of Scientific Affairs,
Allergen Products Manufacturers Association.
In addition, in the interest of fairness, FDA is disclosing that his
employer, Alk Abello, is a manufacturer of allergen extracts. In the event the discussions involve specific
products or firms not on the agenda, for which members have a financial
interest, members are reminded of the need to exclude themselves from these
discussions. Their exclusion will be
noted in the public record. With
respect to all other meeting participants, we ask in the interest of fairness
that you address any current or previous financial involvement with any firm
whose products you wish to comment upon."
That
ends the reading of the Conflict of Interest Statement.
Doctor
Burks, I turn the meeting over to you.
ACTING
DIRECTOR BURKS: I want to thank everybody for the conference call, and I
especially thank Bill for allowing us to do the conference call, rather than
having to come to Washington, and thank Jay for helping arrange that.
What
we'll do for the next hour and a half or so is to listen to several
presentations by Jay and Ron Rabin, and it's on the agenda that you have, and I
think each of you have the slides. If
you have questions as you are going along, if you'd just identify yourself and
ask them, just try to stick to the topic that Jay is addressing at that time,
and then he'll leave time for questions at the end of each section to see if we
need to say anything else.
So,
with that, Jay, we are ready to get started.
DOCTOR
SLATER: Terrific, thank you very much, Wes, and thank you all for
participating. You know, as you well
know in the past this committee has been responsible for valuable
contributions, and we look forward to this meeting every year.
Since
I'm not in the room with you, I can't point to the slides. We are going to try, as we go along, to
identify what slide we are on. All of
the slides that we're using today are numbered, and we're going to identify
them as we go along every once in a while by number, to make sure we are all
literally on the same page.
We
are now in the first ? these
presentations are also numbered in order.
There are five presentation files that you were sent, and it should be
pretty easy to decide where we are but I will identify them as we go along ? we are now in the first presentation, the Lab
Overview, and after the title slide you can go on to the second slide, please.
This
is, basically, what we are going to cover today in our meeting. This is slide two out of ten. We'll start with the Lab Overview, in which
we cover some staffing issues, lot release, reference, maintenance activities
of our laboratory. That will be fairly
brief. We will then get into the meat
of the presentation, which involves a review by me and Ron broadly speaking of
the research activities in the lab.
Then I will focus on two specific areas of both research and regulatory
interests. One is our activities in
cockroach allergen standardization, and the other is our effort to develop
novel methods of determining the potency of allergenic extract, in particular,
our very recent and early work on using antibody micro arrays for this purpose.
Next
slide, please.
So,
quickly, we are going to go through the Lab Overview section, covering
staffing, lot release and reference maintenance activities.
Let's
go to slide four.
The
two principal investigators in our laboratory are myself, I've been here for
five years, and Ronald Rabin, who has been with us now for three years. We have three post doctoral fellows, Bo Chi,
Jinsong Chang, Nicolette deVore.
Next
slide, please.
Those
of you that have been here for meetings know that I would normally ask people
to stand up, but that would be a little silly under these circumstances, but
they are all here and listening to the presentations.
Our
research technicians, on slide five, Al Gam, Mona Febus, Marc Alston, Cherry
Valeriod and Katia Dobrovolskaia.
Next
slide, slide six. This is one of my
favorite slides. This is a slide in
which I give you an idea of where we are and where we have been, in terms of
our staffing. What I include in this
slide is only our research technicians, because those are the staff that really
are in the forefront of our intersection with the allergen products
manufacturers.
And,
as you can see, after a couple of years in which our staffing fluctuated up and
down we've really been in a very stable pattern for the last three and a half
years, with about five research technicians.
I think this has really helped us a lot, this stability, in terms of our
ability to provide service and to effectively regulate the allergenic products.
Next
slide, please.
The
routine regulatory activities that our research technicians are involved in
include lot release, reference distribution, reference maintenance
activities. As you know, for the
standardized allergenic extracts we maintain the U.S. Standards of Reference
that are used both by us and by all of our manufacturers for effective
measurement of the potency of their extracts.
And so, we devote quite a lot of effort and expense into maintaining and
distributing these references.
Next
slide, please. We are now on slide
eight.
In
the past year, in calendar year 2003, we received 450 protocols which we
reviewed prior to the release of Standardized Allergenic Extracts. Also, in the same calendar year we
distributed 1,423 vials of reference standards in 96 shipments sent to the
manufacturers.
On
the next slide, slide nine, we give a little context to some of these
numbers. You see here the lot release
protocols that were submitted by year for the past five years, and what you can
see is that 450 is more or less around the same mean where we have been for the
last several years, a little bit higher than last year, but definitely in the
same range.
The
next slide, slide ten, we look at our reference distribution activities. The number of shipments, the number of
vials, is down somewhat. It will
probably be a couple of years before we know whether this is really a
trend. If it is, then I'll be very
grateful to our manufacturers. One of
the things that we've been requesting for quite a while is that our
manufacturers use the reference standards economically. But, this is a trend, and they've been heeding
our request, and for that we can all be very thankful.
That's
the end of the first presentation.
I'm
happy to entertain any questions if there are any about that.
ACTING
DIRECTOR BURKS: Does anyone have questions for Jay for this part?
Okay,
you can go on to the next part, Jay.
DOCTOR
SLATER: Thanks very much.
Okay. We are now in presentation number two, which
is entitled, "Research Update."
We can go now to the second slide.
The
active research projects in the lab are detailed on this slide. Among the projects that I'm doing, we are
investing a significant effort in our Cockroach Allergen Standardization
Program, which I'll be talking to you about some more later.
Related
to this, but not absolutely essential, but something that we consider to be an
important contributor to this effort, is our effort to generate cockroach
specific IgE and IgG combinatorial libraries.
We've really been focusing on the IgG work recently, with an aim towards
micro array analysis of allergenic
extracts. And again, this work is very
preliminary, but it's exciting nonetheless, and I'll be going into that in some
more detail.
In
addition, you are all familiar with some of the work that we've doing on
endotoxins in allergen vaccines. We
have some additional data to discuss with you at this ? in fact, in this presentation.
Ron
Rabin has two major projects, the MDR proteins and their involvement in T cell
activation, and RSV responses in human tonsilar tissue, and he'll be talking
about the first of these projects in just a few minutes.
Next
slide, please.
These
are the publications that have come out of the lab this year. You can see them here. We published some of our first work with the
endotoxin content of standardized allergen vaccines. I was also invited to co-author an article in Middleton's
Textbook with Dick Lockey and Bob Esch.
Ron published a paper in the Journal of Immunology on his work
with the CXCR3 induction and CD4 T cell differentiation, and in addition he has
a manuscript in preparation about his work which he'll be talking about a
little bit more in a few minutes.
Next
slide.
At
this year's Academy of Allergy Meeting, this Laboratory contributed six
abstracts, which were all presented at the meeting, and they are detailed on
slide four.
Next
slide, please.
Ron
Rabin was invited to give two outside presentations, one at the SMI Conference
in London in February, 2004, on the relationship between viral respiratory
infections and asthma, and another at the most recent Academy of Allergy
Meeting in March, on the FDA Food, Drug and Cosmetics Act as it applies to
research studies.
Next
slide, please.
And,
I was invited to give a talk at the State of the Art Analytical Methods for The
Characterization of Biological Products Meeting, in June, 2003, in which I
talked about allergenic extracts, and I gave four presentations in workshops
and courses at the most recent Academy meeting.
Next
slide, please.
Ron
and I both maintain outside collaborations.
I've been collaborating with Larry Arlian, at Wright State University in
Dayton, Ohio, as well as with Doctor Patrick Murray, who is the Chief of the
Microbiology Service here at the NIH Clinical Center. Ron has active collaborations going on with Peter Collins at
NIAID, as well as with Mario Roederer at the Vaccine Research Center, also at
NIAID.
Next
slide, please.
So,
I'd like to spend just a few minutes talking about the endotoxin work, which I
first presented to this committee about one year ago, and just to quickly
summarize where we left it last year, we were embarked on an activity in which
we were, basically, trying to update some very old work that had been done in
this laboratory in collaboration with NIH back in the `70s, in which it was
first observed that allergen vaccines, especially dust mite vaccine, contained
a measurable amount of endotoxin.
Our
work focused exclusively on standardized allergen vaccines, in which we found
what's really summarized here on slide number eight, and that is that in
general, although we were able to detect endotoxin in virtually all the
allergen extracts that we examined, we found that the cat and mite extracts had
more than the pollen extracts, that the cat pelt had more than cat hair, and
what was most striking to us, and what really led us to the rest of what we're
going to be presenting today, was our observation that the D. farinae extracts
contained significantly more endotoxin than the D. pteronyssinus extracts.
As
I noted last year, it's not clear that any of these endotoxin amounts are
physiologically significant, but, nonetheless, we felt that we needed to
examine this further to characterize the nature of this endotoxin content.
And,
we wondered about several different possibilities. We wondered about the degree of bioburden that might be
present. We wondered about whether
there might be an endogenous heat-stable and debinding activator in D. farinae,
and we wondered whether there was actually endogenous endotoxin neutralizing
protein in D. pteronyssinus.
Just
to very quickly go through what else we found, next slide please. The next slide is a graphical representation
of the corrected endotoxin content of the different classes of vaccines. Note
that this is on a log scale. The
significant differences are shown, and this, basically, replicates what I had
in the previous slide.
Next
slide, please.
So,
our plan was to investigate the differences between D. farinae and D.
pteronyssinus and to attempt to identify some of these organisms.
Next
slide, please. We are now on slide 11.
Our
first approach, which consumed most of the year, was our attempt to actually
culture organisms out of these different mite preparations. We were fortunate enough to be able to
obtain fresh mite and egg materials from three different sources. These mites were all washed, free of media,
using two different methods. One was
sieving, in which the mites were caught on a fine mesh sieve, and the growth
medium was washed off with sterile water.
Another method we used was with sucrose gradients, and both of these
were quite effective, at least visually, at removing all traces of
contaminating material from the mites or the eggs. And then, we submitted the material for culture to Pat Murray's
lab over at NIH.
Next
slide, please.
This
slide really summarizes several months' worth of culture work, and the bottom
line is, we were able to culture organisms, both gram positive and gram
negative, out of both of these sources, and there was no really big difference
between the two, either quantitatively or qualitatively.
You'll
note that we obtained E. cloacae, R. pickitii and acinetobacter from both
species of dust mites. We also have
some unidentified gram negative rods, but, basically, our culturing techniques
really did not show us any large differences between the two species of mites.
Next
slide, please.
Possible
problems with this approach include the fact that the culture data were really
non-quantitative, and that, in fact, the bioburdens between the two species
might be very different. We are
actually working on quantifying this now.
The
culture techniques, we should note, of course, have been optimized for human
pathogens, and it's not likely that what we are dealing with in these dust
mites are, in fact, human pathogens, although that's a possibility.
The
organisms may be in privileged sites, and the optimal conditions for extraction
of the organisms may be uncertain. And,
in addition, endosymbiotic organisms are notoriously difficult to culture.
So,
we tried a different approach, even while we are continuing with the culturing
at the same time.
Next
slide, please.
Approach
number two has been used by other investigators to identify endosymbiotic
organisms, and that's actually to look for characteristic DNA of the bacteria
from DAN that's extracted from the mites.
In this approach, we extract genomic DNA from fresh washed mite
material, and then amplify with 16S ribosomal RNA primers. As you know, 16 S ribosomal RNA is specific
for bacteria, and the sequencing has been well identified. In fact, this approach of amplifying 16S
ribosomal RNA is a well-established technique to try to track bacteria.
We
identified individual clones with restriction fragment analyses. We sequenced and then we attempt ? the idea was to attempt to identify predominant
organisms.
Slide
15, next slide, please.
What
you can see here is just an acerose gel that shows that we were, in fact,
successful at extracting what appeared to be reasonably good quality DNA from
both species of mites. This was using
standard techniques.
Next
slide, please.
These
are the 16S ribosomal primers that we used.
The sequences were based on an article from 1991 by Weisburg in the Journal
of Bacteriology, and these primers have, in fact, been used in multiple
experiments by many investigators since that time. It's the upper case bases that are specific for the 16S RNA, the
lower case segments of the primers are tails that include, as you can see,
specific restriction enzyme sites for easy insertion and characterization.
Next
slide, please.
On
the next slide you can see that we were able to obtain 1.6 KB TCR fragments of
DNA using this amplification method from both D. pteronyssinus and D.
farinae. Now, you'll note that we used
two different primer pairs. One primer
pair, primer pair No. 1, really is relatively non-specific, and would be expected
to generate results from most eubacteria, and primer pair No. 2 would allegedly
be more specific for enterics.
But,
you can see that we were able to obtain fragments from both organisms. Qualitatively, there appears to be somewhat
more from D. farinae, but as you know without good internal controls it's
impossible to quantify TCR results.
Next
slide, please.
We
then did a substantial amount of DNA sequencing, and these are the sequences
that we recovered. Now, the fact is that from both organisms of dust mites the
most predominant recovery is the first organisms ? the first two organisms that are indicated on this slide, Bartonella
or Rochalimaea species, specifically, Bartonella henselae and Bartonella
quintana. Just to refresh your
memories, Bartonella organisms are responsible ? are the pathogens in cat scratch fever and in trench fever, which we
don't normally see very much nowadays, although cat scratch fever we certainly
see. Bartonella is also associated with
infections in immune compromised individuals.
There has been a series of reports of it causing endocarditis in immune
compromised individuals, such as HIV positive patients and homeless
individuals. It's also responsible for
bacillary angiomatous in HIV positive patients.
Needless
to say, if there were Bartonella in our dust mites they would not survive into
the final extract. There's no evidence
whatever of live Bartonella in our extracts at all. But, there is evidence, based on this very preliminary study,
that Bartonella species may be in this endosymbiotic with some of our dust mite
species.
Next
slide, please.
Just
a quick review, Bartonella endotoxin
has, in fact, been fairly well described, both functionally and
structurally. It's of interest from a scientific point of view, because it has
a high degree of LAL reactivity, but in both human cells and in rat cells it
has minimal inflammatory responses, and there's actually minimal activation of ? like receptors 2 and 4, and the two publications
very recent are indicated in the bottom of this slide.
Next
slide, please.
Obviously,
this is a very early finding, and we are not ready yet to publish it in a peer
review journal, because we really need to verify the source of the
endotoxin. We need to do high-fidelity
PCR and verify some of this sequencing data.
We need to get some additional mite sources, and we need to attempt to
profile the LPS structurally, which we actually can do with colleagues here at
CBER.
We
are also in the process of putting together internal standards so that we can
quantify the DNA in our source materials.
Obviously, if there's just as much signal from D. farinae and D.
pteronyssinus, this may be of interest, but it certainly does not explain the
finding of much more LAL reactive endotoxin in D. farinae extracts.
And,
we are going to also need to look physiologically at the effects of this
endotoxin on immune responses. These
are all studies that are in progress.
That's
the end of my presentation. We are
going to go on next to Ron Rabin's research presentation, but I'd like to give
you an opportunity to ask questions before we do that.
DOCTOR
GRANADY: This is Lynelle Granady.
DOCTOR
SLATER: Hi, Lynelle.
DOCTOR
GRANADY: Hi. This is actually really
very, very interesting. I have a quick
question about the initial cultures, if you were able to culture the bacteria
from the extracts or culture small amounts of bacteria from the extracts?
DOCTOR
SLATER: No, no, I'm sorry, let me stop you.
You can go on with the question afterwards, but we cultured nothing at
all from the extracts. They are
sterile. We cultured this from mites,
live mites.
DOCTOR
GRANADY: Oh, okay, from the live mites.
DOCTOR
SLATER: Yes.
DOCTOR
GRANADY: Now, is it possible to ? how do you
determine which ? I don't
know how to exactly ask the question ? but how ? is it possible to actually measure endotoxin
from that same ? from the
live mites, or not really?
DOCTOR
SLATER: Yes, we've actually done that.
Well, I mean, measuring the ? you have to
sort of mulch up the mites to measure the endotoxins.
DOCTOR
GRANADY: Right.
DOCTOR
SLATER: You kill them in the process of doing it.
DOCTOR
GRANADY: Right.
DOCTOR
SLATER: But, we've done that. In our
studies that we presented last year, we were able to show that endotoxin was
not only present in the extract, but also in the source material, which is the
live mites. So, it's present in both.
Are
you asking whether it's possible to identify which organism the endotoxin comes
from?
DOCTOR
GRANADY: Yes.
DOCTOR
SLATER: Yes, the answer is yes. We haven't really successfully done that yet,
but there are a number of papers in which endotoxins can be profiled, both
crudely on SDS-PAGE, and also much more sophisticated using HPLC and gas
chromatography. We haven't done that
yet, although we had intended to do that, we just sort of got sidetracked a
little bit, but that's definitely something that we are interested in.
The
problem, Lynelle, is that no one has really ever attempted to do this on a
mixed culture, and that would be a little bit hard to sort out. The profiling activities, in general, are on
pure cultures or vaccines, and my guess is that ? we are certainly planning on doing this, but my guess is that the data
are going to be a little bit messy, just because they are mixed.
DOCTOR
GRANADY: I see.
Thank
you.
DOCTOR
SLATER: Thank you.
ACTING
DIRECTOR BURKS: Anybody else have questions for Jay?
All
right, go ahead.
DOCTOR
RABIN: Hi, this is Ron Rabin, and what I'm going to discuss with you is a
project, and show you some data of a manuscript that's pretty much
written. We are waiting for one
experiment and then, you know, the final touches and getting it out.
If
you'll to slide number two then. So, my
interest in the multi-drug resistant proteins came from a serendipitous
observation that I made while I was still a Fellow in Josh Farber's lab. And, as some of you may know, I have a
reasonable amount of experience in flow cytometry, and spent some time in that
laboratory looking at calcium flux in response to chemokines, and as a
relationship to chemokine receptor expression on lymphocytes.
And,
as sort of a side project I began to look at responses in ? in patients with Wegener's granulomatosis with a
friend of mine. We were, basically,
just playing, and in the process of looking at this I noticed that the patient
cells had lost a lot ? or had a
lot less of the calcium probe, which is
ENDO 1, in their cells than cells from the healthy controls that we were
using in the experiment. This was
consistent from experiment to experiment, and so I wondered, I thought about
that and wondered whether or not because these patients sort of had ? were in a state of inflammation, or activation,
in a very general term, whether or not that affects this probe concentration,
and the probe concentration then would reflect gene expression of some sort of
a probe transporter, which might then modulate activation and give incite into
a pharmacologic target. So, that was
sort of the fantasy.
And,
the cartoon that I'm showing you is drawing what I basically observed. So, when one does calcium studies on a flow
cytometer with ENDO 1 you are looking at a ratio, which is essentially the
slope of fluorescent's emission into violet on the Y axis or blue on the X
axis, and you could see at normal the cells were kind of high up on the X/Y
plot there, and the Wegener's granulomatosis patients that slope was down in
the corner. But, the slope ? the lines were in different positions, but the
slopes were the same, and it's the slope that reflects the calcium. So, it wasn't an issue of calcium, it was an
issue of probe concentration, and that's really the bottom line.
And
so, if you go to slide number three, that brought me to the MDR family, because
the MDR family are proteins that transport substances across cellular
membranes, against a concentration gradient, in an energy-dependent manner.
They
are in a larger group of what are called ABC proteins, ATP Binding Cassette
proteins, that contain distinctive nucleotide binding domains, and their genes
are highly conserved across species.
The first member that was identified was MDR1, which I'm sure many of
you have also heard of identified as P-glycoprotein. And, its substrates are large hydrophobic cations, including such
molecules as Doxorubicin and Ritonavir, and even the calcium channel blocker
Verapamil.
A
little bit later, the MDR-associated Resistant Protein-1 was identified, and
now there are nine proteins that carry that prefix of MRP, and it has some
homology to MDR, but it's actually more closely related to the Cystic Fibrosis
transport protein.
MDR
? MRP1 transports organic anions and it also
transports glutathione and glutathione conjugates, and it transports ? in fact, it is the mechanism by which cells
export LTC4, so it does have a physiologic function, and it is the
transporter of many of these florescent molecules that we use as probes in
cellular biology, because the molecules themselves are organic anions. So, my
attention was then turned to MRP1, slide four.
Just
to give you a little bit of context of these MDR family proteins, or the MRPs,
you can see there's an identity amongst them or between them, the low, and they
are widely distributed along the human genome.
Many of them do transport conjugated glutathione, and some of them have
known physiologic substrates and some of them don't, and there's various new
level of distribution of expression, as you can see.
Slide
five, please.
So,
the first thing that we did was just to look at the basic ? if the basic hypothesis had any truth to it,
then we would see two things. We might
see a difference in expression of MRP1 in mammary cells versus naive T cells,
and we should see a difference with activation. And, this 35 cycle RT-PCR on slide five demonstrates that that,
in fact, is the case. So, if you look
at the set of ? the area
MRP1 there, you'll notice that the band is much brighter on CD4 memory versus
naive, CD8 memory versus naive is also a little bit brighter, it seems to be
expressed to some degree, and then K cells, B cells, and a little bit in
monocytes.
To
further drive home the preferential expression, these cells were ? the memory and naive cells were sorted by flow
cytometry, using two markers in addition to CD4 and CD8, but we know for a fact
that that isn't ? you don't
get pure naive cells, and really one way to get absolutely pure naive cells is
to use cord CD4 T cells. And there on
the far right lanes you can see that there's no expression of MRP1 in cord CD4
T cells, and that after three days with anti-CD3 and anti-CD28 there is
expressions regulated.
Now,
I'm showing you a number of the members of the family for two reasons, one to
call attention that this isn't just some sort of general thing, non-specific
event, because MRP3, for example, is not expressed in any context, and MRP54
doesn't really appear to be affected by memory subsets in any event, but then
there are some molecules that seem to have this same level or the same pattern
of expression, such as MRP4 and MDR1.
Next
slide, please.
So,
we started ? we set about using a small
molecule inhibitor of MRP1, that is well known in the literature, called
MK-571. MK-571, as many of you might
know, is sort of the granddaddy of singular or monteleukast, and so it is a leukotron,
it is a ? LTR1 antagonist at very
low concentrations, but I'm sure related to the fact that MRP1 is the exporter
of LTC4 at higher concentrations MK-571 does block this pump. And so, we first
just looked at ? we used the
molecule TSST, the superantigen, to stimulate our T cells for, I think, all of
the studies that I'm showing you here, because in certain times we thought we
might want to look at those responding cells, and since TSST-1 is fairly
specific for V beta 2, we can follow the responding cells if we wish.
And
so, on the left these cells have been stimulated with the superantigen
overnight, and you can see that they look like cells, they look as cells
generally look when they've been stimulated overnight with some sort of
superantigen, they tend to cluster and become aggregates. And, on your right, with the MK-571, they
are just in a homogenous suspension.
They
are mostly alive by the way.
Next
slide.
So,
slide number seven then shows some ? a little
bit more specific characterizations of the inhibition here, and so these cells
now were stimulated and we looked at them four hours after stimulation with
TSST-1 in the presence of absence of this inhibitor MK-571, and on the far left
you can see on the X axis that there's a subset of cells that express CD69
after activation and then a subset of those are staining positive for
interferon gamma. In the presence of 50
micromolar, we've cut that down ? the MK-571,
we've lost a lot of expression of the interferon gamma and CD69 both, and it's
practically all ablated at 125 micromolar.
Next
experiment.
To
look at the cytokine profiles a little bit more closely, we did experiments
such as demonstrated on slide number eight here, which shows interferon gamma
on the X axis and IL-4 on the Y axis, and you'll see a very clear
dose-dependent decrease in interferon gamma, as the dose of MK-571 goes
up. What you don't see is that IL-4, or
what you also see, I guess, is that IL-4 is similarly ? is not affected, okay, and that has struck us,
you know, as very odd.
Now,
we've tried to make sure that this is, in fact, the case, because, as you know,
there's a lot of ? there's a
lot more ? you know, the numbers are
better for gamma than 4, and so we wanted to be sure we weren't playing with a
number game, but, in fact, this does look like the case. It does look like at
least in the context of these experiments MK-571 inhibiting MRP1 doesn't seem
to affect IL-4. And, at the time I was
a bit baffled by that, and I have a number of thoughts about that that I can
share with you towards the end.
Next
slide.
The
specificity ? but, at any rate, to look
at the gamma at least, this is ? we did a
number of experiments now, so these are experiments similar to and including
the one that I showed you on the previous slide, showing the dose response, and
on the upper half of the panel there is the cumulative normalized response to
interferon gamma of all these, and you can see that this is a statistically
significant, dose-dependent decrease, and that this dose-dependent decrease in
cellular expression of interferon gamma protein is at least ? is reflected by a decrease in gene expression,
as shown by the TaqMan assay below.
Next
slide, please.
We
looked at a bunch of other cytokines using the BD biosciences cytokine bead
assay, and so this is now secreted into the supernatant, and the interferon
gamma, as you can see, is no surprise, it's reflected by supernatant
concentration, as is TNF and IL-10, and to some degree IL-2. What's kind of
interesting about IL-2, and it may give us some incite into the mechanism that
this is working, is that you can see that the curves are a bit different, and
it appears that IL-2 is not as easily affected by the MRP1 inhibition. But, it is affected, nonetheless.
And,
this last point at 125 micromolar was excluded from the regression line,
because a queue test demonstrated that it was clearly different than the
previous five points.
Next
slide, please.
Well, we wanted ? I was curious about whether or not this inhibition was cell specific, was T cell specific or not, and so one of the things that I did was, we looked at monocyte-derived macrophages, and we stimulate